Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC108751.1-201ENST00000490852 363 ntBASIC13.71□□□□□ -0.21
CLDN12P56749 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN12P56749 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 AC140479.7-201ENST00000636301 2332 ntBASIC13.71□□□□□ -0.21
CLDN12P56749 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN12P56749 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
CLDN12P56749 PTENP1-202ENST00000532280 3996 ntBASIC13.71□□□□□ -0.22
CLDN12P56749 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDN12P56749 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN12P56749 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN12P56749 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.7□□□□□ -0.22
CLDN12P56749 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.7□□□□□ -0.22
CLDN12P56749 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN12P56749 AC243562.2-201ENST00000561247 970 ntBASIC13.7□□□□□ -0.22
CLDN12P56749 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.7□□□□□ -0.22
CLDN12P56749 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN12P56749 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 AL691432.1-201ENST00000596308 1422 ntBASIC13.7□□□□□ -0.22
CLDN12P56749 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN12P56749 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN12P56749 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN12P56749 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CLDN12P56749 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
CLDN12P56749 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN12P56749 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN12P56749 CICP14-201ENST00000629111 2732 ntBASIC13.7□□□□□ -0.22
CLDN12P56749 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN12P56749 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CLDN12P56749 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN12P56749 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN12P56749 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN12P56749 FAM197Y8-203ENST00000450145 560 ntBASIC13.69□□□□□ -0.22
CLDN12P56749 AC018712.1-201ENST00000455767 687 ntBASIC13.69□□□□□ -0.22
CLDN12P56749 AC092910.1-201ENST00000482027 1129 ntBASIC13.69□□□□□ -0.22
CLDN12P56749 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN12P56749 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms