Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF4P48230 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF4P48230 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF4P48230 AC079112.1-201ENST00000454972 939 ntBASIC17.48■□□□□ 0.39
TM4SF4P48230 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.48■□□□□ 0.39
TM4SF4P48230 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF4P48230 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF4P48230 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.48■□□□□ 0.39
TM4SF4P48230 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF4P48230 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF4P48230 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TM4SF4P48230 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.48■□□□□ 0.39
TM4SF4P48230 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF4P48230 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TM4SF4P48230 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF4P48230 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF4P48230 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 AP001094.4-201ENST00000579008 2176 ntBASIC17.47■□□□□ 0.39
TM4SF4P48230 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TM4SF4P48230 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 AC012362.1-201ENST00000434906 739 ntBASIC17.47■□□□□ 0.39
TM4SF4P48230 AC010234.1-201ENST00000494599 870 ntBASIC17.47■□□□□ 0.39
TM4SF4P48230 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.47■□□□□ 0.39
TM4SF4P48230 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 FAM90A7P-201ENST00000382628 1395 ntBASIC17.47■□□□□ 0.39
TM4SF4P48230 FAM90A23P-201ENST00000400136 1395 ntBASIC17.47■□□□□ 0.39
TM4SF4P48230 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.47■□□□□ 0.39
TM4SF4P48230 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF4P48230 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF4P48230 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF4P48230 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TM4SF4P48230 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF4P48230 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.46■□□□□ 0.39
TM4SF4P48230 AC012441.2-201ENST00000444843 739 ntBASIC17.46■□□□□ 0.39
TM4SF4P48230 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF4P48230 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.46■□□□□ 0.39
TM4SF4P48230 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF4P48230 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.46■□□□□ 0.39
TM4SF4P48230 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 AC008805.1-201ENST00000590892 364 ntBASIC17.46■□□□□ 0.39
TM4SF4P48230 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF4P48230 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF4P48230 AL132780.4-201ENST00000624870 1135 ntBASIC17.46■□□□□ 0.39
TM4SF4P48230 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF4P48230 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF4P48230 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TM4SF4P48230 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF4P48230 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TM4SF4P48230 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TM4SF4P48230 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TM4SF4P48230 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TM4SF4P48230 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TM4SF4P48230 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TM4SF4P48230 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms