Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.51■□□□□ 0.07
VARSP26640 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.51■□□□□ 0.07
VARSP26640 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.51■□□□□ 0.07
VARSP26640 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.51■□□□□ 0.07
VARSP26640 AC026150.2-201ENST00000564693 1156 ntBASIC15.51■□□□□ 0.07
VARSP26640 AC051619.7-201ENST00000568314 623 ntBASIC15.51■□□□□ 0.07
VARSP26640 RN7SL371P-201ENST00000578099 267 ntBASIC15.51■□□□□ 0.07
VARSP26640 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.51■□□□□ 0.07
VARSP26640 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.51■□□□□ 0.07
VARSP26640 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
VARSP26640 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARSP26640 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.51■□□□□ 0.07
VARSP26640 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 AC020658.6-201ENST00000623564 1870 ntBASIC15.5■□□□□ 0.07
VARSP26640 BNIP3P1-202ENST00000550043 1585 ntBASIC15.5■□□□□ 0.07
VARSP26640 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.5■□□□□ 0.07
VARSP26640 AC107890.1-201ENST00000422478 521 ntBASIC15.5■□□□□ 0.07
VARSP26640 SPDYE14P-201ENST00000442619 822 ntBASIC15.5■□□□□ 0.07
VARSP26640 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.5■□□□□ 0.07
VARSP26640 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.5■□□□□ 0.07
VARSP26640 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.5■□□□□ 0.07
VARSP26640 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.5■□□□□ 0.07
VARSP26640 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.5■□□□□ 0.07
VARSP26640 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.5■□□□□ 0.07
VARSP26640 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.5■□□□□ 0.07
VARSP26640 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARSP26640 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.49■□□□□ 0.07
VARSP26640 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VARSP26640 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.49■□□□□ 0.07
VARSP26640 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.49■□□□□ 0.07
VARSP26640 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.49■□□□□ 0.07
VARSP26640 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VARSP26640 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.49■□□□□ 0.07
VARSP26640 AC079781.5-202ENST00000641784 3743 ntBASIC15.49■□□□□ 0.07
VARSP26640 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.49■□□□□ 0.07
VARSP26640 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VARSP26640 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARSP26640 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VARSP26640 AC015922.1-201ENST00000421102 1152 ntBASIC15.49■□□□□ 0.07
VARSP26640 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms