Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN3P20807 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN3P20807 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN3P20807 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 AC098859.1-201ENST00000502915 1238 ntBASIC15.15■□□□□ 0.02
CAPN3P20807 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.15■□□□□ 0.02
CAPN3P20807 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.15■□□□□ 0.02
CAPN3P20807 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN3P20807 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CAPN3P20807 AJ011932.1-201ENST00000621707 465 ntBASIC15.15■□□□□ 0.02
CAPN3P20807 AL161645.1-201ENST00000622716 1255 ntBASIC15.15■□□□□ 0.02
CAPN3P20807 AL035252.4-201ENST00000624174 288 ntBASIC15.15■□□□□ 0.02
CAPN3P20807 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CAPN3P20807 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CAPN3P20807 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN3P20807 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 AL136982.4-201ENST00000437689 1740 ntBASIC15.14■□□□□ 0.01
CAPN3P20807 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPN3P20807 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CAPN3P20807 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN3P20807 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPN3P20807 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
CAPN3P20807 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN3P20807 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CAPN3P20807 AF228730.6-201ENST00000641497 218 ntBASIC15.14■□□□□ 0.01
CAPN3P20807 AC084121.3-201ENST00000641716 218 ntBASIC15.14■□□□□ 0.01
CAPN3P20807 AC105233.6-201ENST00000642093 218 ntBASIC15.14■□□□□ 0.01
CAPN3P20807 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CAPN3P20807 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CAPN3P20807 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN3P20807 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms