Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC3P19447 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC3P19447 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC3P19447 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC3P19447 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC3P19447 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ERCC3P19447 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.16■□□□□ 0.5
ERCC3P19447 AC134915.1-201ENST00000426461 574 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.16■□□□□ 0.5
ERCC3P19447 BCRP2-202ENST00000447763 634 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.16■□□□□ 0.5
ERCC3P19447 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.16■□□□□ 0.5
ERCC3P19447 BCRP6-201ENST00000510112 632 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 BCRP7-201ENST00000511549 544 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.16■□□□□ 0.5
ERCC3P19447 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.16■□□□□ 0.5
ERCC3P19447 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC3P19447 AC124283.3-201ENST00000570869 594 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.16■□□□□ 0.5
ERCC3P19447 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.16■□□□□ 0.5
ERCC3P19447 AC134407.2-201ENST00000625089 1978 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ERCC3P19447 INTS4P2-202ENST00000614726 2019 ntBASIC18.16■□□□□ 0.5
ERCC3P19447 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ERCC3P19447 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC3P19447 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC3P19447 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 AC092850.2-201ENST00000623821 2697 ntBASIC18.15■□□□□ 0.5
ERCC3P19447 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC3P19447 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.15■□□□□ 0.5
ERCC3P19447 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 PHKG1P2-201ENST00000457537 863 ntBASIC18.15■□□□□ 0.5
ERCC3P19447 SLED1-202ENST00000512051 380 ntBASIC18.15■□□□□ 0.5
ERCC3P19447 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.15■□□□□ 0.5
ERCC3P19447 ENPP7P5-201ENST00000541031 1031 ntBASIC18.15■□□□□ 0.5
ERCC3P19447 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.15■□□□□ 0.5
ERCC3P19447 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 AC010491.1-201ENST00000563101 2797 ntBASIC18.15■□□□□ 0.5
ERCC3P19447 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.15■□□□□ 0.5
ERCC3P19447 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC3P19447 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.15■□□□□ 0.5
ERCC3P19447 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC3P19447 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms