Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 CICP14-201ENST00000629111 2732 ntBASIC18.78■□□□□ 0.6
NCLP19338 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.78■□□□□ 0.6
NCLP19338 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.78■□□□□ 0.6
NCLP19338 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 CXCL1P1-201ENST00000502804 216 ntBASIC18.78■□□□□ 0.6
NCLP19338 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 MIR3687-2-201ENST00000577708 61 ntBASIC18.78■□□□□ 0.6
NCLP19338 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 MIR3687-1-201ENST00000614492 61 ntBASIC18.78■□□□□ 0.6
NCLP19338 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLP19338 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.77■□□□□ 0.6
NCLP19338 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.77■□□□□ 0.6
NCLP19338 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NCLP19338 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 HAUS4P1-201ENST00000406739 1145 ntBASIC18.77■□□□□ 0.6
NCLP19338 IGLL3P-201ENST00000412472 434 ntBASIC18.77■□□□□ 0.6
NCLP19338 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.77■□□□□ 0.6
NCLP19338 MCCD1P2-201ENST00000423228 335 ntBASIC18.77■□□□□ 0.6
NCLP19338 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.77■□□□□ 0.6
NCLP19338 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NCLP19338 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.77■□□□□ 0.6
NCLP19338 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.77■□□□□ 0.6
NCLP19338 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.77■□□□□ 0.6
NCLP19338 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.77■□□□□ 0.6
NCLP19338 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.77■□□□□ 0.6
NCLP19338 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NCLP19338 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLP19338 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
NCLP19338 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NCLP19338 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NCLP19338 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
NCLP19338 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCLP19338 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NCLP19338 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NCLP19338 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.76■□□□□ 0.59
NCLP19338 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.76■□□□□ 0.59
NCLP19338 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NCLP19338 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms