Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 WASH3P-207ENST00000560956 1394 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 FO538757.1-201ENST00000623083 1397 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 FAM220BP-201ENST00000377689 816 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 RPL5P21-201ENST00000404620 815 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 AL139010.1-201ENST00000454878 894 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 KRT18P56-201ENST00000507275 550 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 AC112191.1-201ENST00000523689 701 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 HNRNPUP1-201ENST00000554987 333 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 AP002472.1-201ENST00000577490 586 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 AC097359.3-201ENST00000603982 1210 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 AC099522.2-201ENST00000607001 744 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 AC064836.3-201ENST00000607928 673 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 SBF1P1-201ENST00000444527 5631 ntBASIC13.34□□□□□ -0.27
HIST1H1DP16402 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H1DP16402 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H1DP16402 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H1DP16402 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H1DP16402 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
HIST1H1DP16402 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
HIST1H1DP16402 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HIST1H1DP16402 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H1DP16402 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H1DP16402 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST1H1DP16402 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms