Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 AL022342.1-201ENST00000400363 863 ntBASIC17.04■□□□□ 0.32
CCDC172P0C7W6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 POLD2P1-201ENST00000511220 997 ntBASIC17.04■□□□□ 0.32
CCDC172P0C7W6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 AC127383.1-201ENST00000444697 1800 ntBASIC17.04■□□□□ 0.32
CCDC172P0C7W6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 AC005237.2-201ENST00000434368 219 ntBASIC17.03■□□□□ 0.32
CCDC172P0C7W6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 CEND1P1-201ENST00000451006 455 ntBASIC17.03■□□□□ 0.32
CCDC172P0C7W6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC172P0C7W6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 AL359258.3-201ENST00000622910 2331 ntBASIC17.02■□□□□ 0.32
CCDC172P0C7W6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC172P0C7W6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms