Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 AC105250.1-201ENST00000509378 2057 ntBASIC15.51■□□□□ 0.07
CAPN1P07384 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CAPN1P07384 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CAPN1P07384 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN1P07384 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN1P07384 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 HLA-H-201ENST00000383620 1096 ntBASIC15.5■□□□□ 0.07
CAPN1P07384 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 AC236430.1-201ENST00000402231 743 ntBASIC15.5■□□□□ 0.07
CAPN1P07384 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN1P07384 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 AC004890.2-204ENST00000481968 304 ntBASIC15.5■□□□□ 0.07
CAPN1P07384 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN1P07384 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.5■□□□□ 0.07
CAPN1P07384 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.5■□□□□ 0.07
CAPN1P07384 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN1P07384 AC003101.2-201ENST00000612557 442 ntBASIC15.5■□□□□ 0.07
CAPN1P07384 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN1P07384 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CAPN1P07384 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPN1P07384 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN1P07384 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN1P07384 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CAPN1P07384 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CAPN1P07384 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 AC090616.6-203ENST00000579186 1945 ntBASIC15.49■□□□□ 0.07
CAPN1P07384 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.49■□□□□ 0.07
CAPN1P07384 TSSK5P-201ENST00000423978 907 ntBASIC15.49■□□□□ 0.07
CAPN1P07384 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.49■□□□□ 0.07
CAPN1P07384 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN1P07384 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 AL590560.3-201ENST00000623350 461 ntBASIC15.49■□□□□ 0.07
CAPN1P07384 AC073592.8-201ENST00000624126 511 ntBASIC15.49■□□□□ 0.07
CAPN1P07384 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms