Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSF1RP07333 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.04■□□□□ 0.64
CSF1RP07333 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.04■□□□□ 0.64
CSF1RP07333 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.04■□□□□ 0.64
CSF1RP07333 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.04■□□□□ 0.64
CSF1RP07333 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.04■□□□□ 0.64
CSF1RP07333 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.04■□□□□ 0.64
CSF1RP07333 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.04■□□□□ 0.64
CSF1RP07333 AC010328.2-201ENST00000597698 1111 ntBASIC19.04■□□□□ 0.64
CSF1RP07333 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSF1RP07333 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1RP07333 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.04■□□□□ 0.64
CSF1RP07333 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CSF1RP07333 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
CSF1RP07333 AHCYP2-201ENST00000430630 1300 ntBASIC19.03■□□□□ 0.64
CSF1RP07333 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CSF1RP07333 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSF1RP07333 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.03■□□□□ 0.64
CSF1RP07333 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.03■□□□□ 0.64
CSF1RP07333 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.03■□□□□ 0.64
CSF1RP07333 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CSF1RP07333 RPL13AP20-201ENST00000459725 609 ntBASIC19.03■□□□□ 0.64
CSF1RP07333 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.03■□□□□ 0.64
CSF1RP07333 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.03■□□□□ 0.64
CSF1RP07333 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.03■□□□□ 0.64
CSF1RP07333 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.03■□□□□ 0.64
CSF1RP07333 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.03■□□□□ 0.64
CSF1RP07333 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.03■□□□□ 0.64
CSF1RP07333 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSF1RP07333 AC009542.2-202ENST00000619004 1067 ntBASIC19.03■□□□□ 0.64
CSF1RP07333 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.03■□□□□ 0.64
CSF1RP07333 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CSF1RP07333 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.03■□□□□ 0.64
CSF1RP07333 AC092850.2-201ENST00000623821 2697 ntBASIC19.03■□□□□ 0.64
CSF1RP07333 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CSF1RP07333 PRAL-201ENST00000624952 3286 ntBASIC19.03■□□□□ 0.64
CSF1RP07333 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1RP07333 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CSF1RP07333 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.02■□□□□ 0.64
CSF1RP07333 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CSF1RP07333 HLA-K-203ENST00000430151 1046 ntBASIC19.02■□□□□ 0.64
CSF1RP07333 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.02■□□□□ 0.64
CSF1RP07333 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.02■□□□□ 0.64
CSF1RP07333 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.02■□□□□ 0.64
CSF1RP07333 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.02■□□□□ 0.64
CSF1RP07333 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1RP07333 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CSF1RP07333 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.02■□□□□ 0.64
CSF1RP07333 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSF1RP07333 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSF1RP07333 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSF1RP07333 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSF1RP07333 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1RP07333 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CSF1RP07333 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms