Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHGBP05060 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHGBP05060 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.74■□□□□ 0.59
CHGBP05060 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHGBP05060 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.74■□□□□ 0.59
CHGBP05060 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 DBET-201ENST00000630918 3363 ntBASIC18.73■□□□□ 0.59
CHGBP05060 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.73■□□□□ 0.59
CHGBP05060 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHGBP05060 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.73■□□□□ 0.59
CHGBP05060 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.73■□□□□ 0.59
CHGBP05060 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.73■□□□□ 0.59
CHGBP05060 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.73■□□□□ 0.59
CHGBP05060 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.73■□□□□ 0.59
CHGBP05060 AL035252.4-201ENST00000624174 288 ntBASIC18.73■□□□□ 0.59
CHGBP05060 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.73■□□□□ 0.59
CHGBP05060 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 AC087481.3-201ENST00000602886 1894 ntBASIC18.73■□□□□ 0.59
CHGBP05060 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHGBP05060 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHGBP05060 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHGBP05060 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHGBP05060 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.72■□□□□ 0.59
CHGBP05060 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.72■□□□□ 0.59
CHGBP05060 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHGBP05060 AC107373.2-201ENST00000607735 490 ntBASIC18.72■□□□□ 0.59
CHGBP05060 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.72■□□□□ 0.59
CHGBP05060 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.72■□□□□ 0.59
CHGBP05060 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.72■□□□□ 0.59
CHGBP05060 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.72■□□□□ 0.59
CHGBP05060 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 INTS4P2-202ENST00000614726 2019 ntBASIC18.72■□□□□ 0.59
CHGBP05060 AC138035.3-201ENST00000622706 2791 ntBASIC18.72■□□□□ 0.59
CHGBP05060 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CHGBP05060 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHGBP05060 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms