Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRAP04437 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRAP04437 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TCRAP04437 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.99□□□□□ -0.49
TCRAP04437 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRAP04437 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRAP04437 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRAP04437 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.99□□□□□ -0.49
TCRAP04437 ST20-AS1-201ENST00000560255 4223 ntBASIC11.99□□□□□ -0.49
TCRAP04437 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.98□□□□□ -0.49
TCRAP04437 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
TCRAP04437 IGLL3P-201ENST00000412472 434 ntBASIC11.98□□□□□ -0.49
TCRAP04437 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 AF186996.4-201ENST00000467186 377 ntBASIC11.98□□□□□ -0.49
TCRAP04437 AC098859.1-201ENST00000502915 1238 ntBASIC11.98□□□□□ -0.49
TCRAP04437 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.98□□□□□ -0.49
TCRAP04437 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TCRAP04437 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 AC061975.2-201ENST00000581722 295 ntBASIC11.98□□□□□ -0.49
TCRAP04437 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.98□□□□□ -0.49
TCRAP04437 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.98□□□□□ -0.49
TCRAP04437 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 AC140479.7-201ENST00000636301 2332 ntBASIC11.98□□□□□ -0.49
TCRAP04437 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRAP04437 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRAP04437 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRAP04437 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 WASH3P-207ENST00000560956 1394 ntBASIC11.97□□□□□ -0.49
TCRAP04437 FO538757.1-201ENST00000623083 1397 ntBASIC11.97□□□□□ -0.49
TCRAP04437 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 CRYGEP-201ENST00000412192 528 ntBASIC11.97□□□□□ -0.49
TCRAP04437 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.97□□□□□ -0.49
TCRAP04437 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 AC096734.2-201ENST00000562054 433 ntBASIC11.97□□□□□ -0.49
TCRAP04437 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms