Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC9.49□□□□□ -0.89
APOBP04114 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 LINC01165-201ENST00000445190 1623 ntBASIC9.49□□□□□ -0.89
APOBP04114 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 MVK-214ENST00000629016 1591 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 AC244394.1-201ENST00000435000 1665 ntBASIC9.48□□□□□ -0.89
APOBP04114 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC9.48□□□□□ -0.89
APOBP04114 AP000911.2-201ENST00000534330 502 ntBASIC9.48□□□□□ -0.89
APOBP04114 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.48□□□□□ -0.89
APOBP04114 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 HPN-206ENST00000597419 1212 ntTSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 AGGF1P2-201ENST00000426656 2106 ntBASIC9.48□□□□□ -0.89
APOBP04114 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 RPL8P2-201ENST00000430538 502 ntBASIC9.48□□□□□ -0.89
APOBP04114 LYPLA2P1-203ENST00000447689 696 ntBASIC9.48□□□□□ -0.89
APOBP04114 REEP5-205ENST00000504247 480 ntTSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 LINC00634-202ENST00000505157 222 ntBASIC9.48□□□□□ -0.89
APOBP04114 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 RNF146-211ENST00000609447 607 ntTSL 4 BASIC9.48□□□□□ -0.89
APOBP04114 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC9.48□□□□□ -0.89
APOBP04114 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 FAM90A7P-201ENST00000382628 1395 ntBASIC9.48□□□□□ -0.89
APOBP04114 FAM90A23P-201ENST00000400136 1395 ntBASIC9.48□□□□□ -0.89
APOBP04114 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 CEP83-AS1-201ENST00000623122 2482 ntBASIC9.48□□□□□ -0.89
APOBP04114 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
APOBP04114 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC9.48□□□□□ -0.89
APOBP04114 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
APOBP04114 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC9.48□□□□□ -0.89
APOBP04114 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.48□□□□□ -0.89
APOBP04114 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC9.48□□□□□ -0.89
APOBP04114 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
APOBP04114 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC9.47□□□□□ -0.89
APOBP04114 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 AC090857.1-201ENST00000527400 390 ntBASIC9.47□□□□□ -0.89
APOBP04114 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
APOBP04114 AC012158.2-201ENST00000536546 354 ntBASIC9.47□□□□□ -0.89
APOBP04114 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms