Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC067750.1-201ENST00000608826 6545 ntBASIC13.96□□□□□ -0.18
APOC1P02654 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
APOC1P02654 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.95□□□□□ -0.18
APOC1P02654 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 AL359258.3-201ENST00000622910 2331 ntBASIC13.95□□□□□ -0.18
APOC1P02654 REXO1L1P-202ENST00000608646 1974 ntBASIC13.95□□□□□ -0.18
APOC1P02654 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
APOC1P02654 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 MIR574-201ENST00000385209 96 ntBASIC13.95□□□□□ -0.18
APOC1P02654 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.95□□□□□ -0.18
APOC1P02654 HTR5BP-201ENST00000430851 1154 ntBASIC13.95□□□□□ -0.18
APOC1P02654 AL592309.1-201ENST00000443127 649 ntBASIC13.95□□□□□ -0.18
APOC1P02654 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.95□□□□□ -0.18
APOC1P02654 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
APOC1P02654 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.95□□□□□ -0.18
APOC1P02654 LINC01225-203ENST00000563550 1244 ntBASIC13.95□□□□□ -0.18
APOC1P02654 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.95□□□□□ -0.18
APOC1P02654 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.95□□□□□ -0.18
APOC1P02654 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
APOC1P02654 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 BNIP3P1-202ENST00000550043 1585 ntBASIC13.95□□□□□ -0.18
APOC1P02654 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC1P02654 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 AC087481.3-201ENST00000602886 1894 ntBASIC13.95□□□□□ -0.18
APOC1P02654 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC1P02654 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.95□□□□□ -0.18
APOC1P02654 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC1P02654 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
APOC1P02654 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
APOC1P02654 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 AL022342.1-201ENST00000400363 863 ntBASIC13.94□□□□□ -0.18
APOC1P02654 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.94□□□□□ -0.18
APOC1P02654 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.94□□□□□ -0.18
APOC1P02654 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.94□□□□□ -0.18
APOC1P02654 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.94□□□□□ -0.18
APOC1P02654 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 KRT8P48-201ENST00000515599 1220 ntBASIC13.94□□□□□ -0.18
APOC1P02654 PGAM5P1-201ENST00000518923 814 ntBASIC13.94□□□□□ -0.18
APOC1P02654 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms