Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 TREML5P-201ENST00000421694 576 ntBASIC15.45■□□□□ 0.06
VPS4BO75351 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
VPS4BO75351 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS4BO75351 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 UGT1A2P-201ENST00000454886 866 ntBASIC15.45■□□□□ 0.06
VPS4BO75351 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 CR383656.12-201ENST00000549567 513 ntBASIC15.45■□□□□ 0.06
VPS4BO75351 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS4BO75351 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS4BO75351 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS4BO75351 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS4BO75351 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
VPS4BO75351 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS4BO75351 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS4BO75351 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.45■□□□□ 0.06
VPS4BO75351 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VPS4BO75351 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS4BO75351 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS4BO75351 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VPS4BO75351 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
VPS4BO75351 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS4BO75351 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
VPS4BO75351 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS4BO75351 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS4BO75351 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.44■□□□□ 0.06
VPS4BO75351 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.44■□□□□ 0.06
VPS4BO75351 HLA-V-201ENST00000429037 534 ntBASIC15.44■□□□□ 0.06
VPS4BO75351 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS4BO75351 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS4BO75351 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS4BO75351 AC073389.1-201ENST00000595595 795 ntBASIC15.44■□□□□ 0.06
VPS4BO75351 MIR6752-201ENST00000618442 71 ntBASIC15.44■□□□□ 0.06
VPS4BO75351 OR2I1P-209ENST00000641730 5365 ntBASIC15.44■□□□□ 0.06
VPS4BO75351 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS4BO75351 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
VPS4BO75351 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS4BO75351 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VPS4BO75351 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS4BO75351 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS4BO75351 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS4BO75351 AC068418.2-201ENST00000577309 3703 ntBASIC15.43■□□□□ 0.06
VPS4BO75351 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VPS4BO75351 C18orf15-201ENST00000623680 2534 ntBASIC15.43■□□□□ 0.06
VPS4BO75351 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VPS4BO75351 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 AC004987.2-201ENST00000395959 1148 ntBASIC15.43■□□□□ 0.06
VPS4BO75351 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.43■□□□□ 0.06
VPS4BO75351 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.43■□□□□ 0.06
VPS4BO75351 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
VPS4BO75351 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
VPS4BO75351 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
VPS4BO75351 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.43■□□□□ 0.06
VPS4BO75351 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.43■□□□□ 0.06
VPS4BO75351 AP005018.1-201ENST00000525475 301 ntBASIC15.43■□□□□ 0.06
VPS4BO75351 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS4BO75351 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS4BO75351 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
VPS4BO75351 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.43■□□□□ 0.06
VPS4BO75351 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS4BO75351 AC099522.2-201ENST00000607001 744 ntBASIC15.43■□□□□ 0.06
VPS4BO75351 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms