Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.26■□□□□ 0.19
MSI1O43347 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.26■□□□□ 0.19
MSI1O43347 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MSI1O43347 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 COX5BP8-201ENST00000416911 349 ntBASIC16.25■□□□□ 0.19
MSI1O43347 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.25■□□□□ 0.19
MSI1O43347 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.25■□□□□ 0.19
MSI1O43347 AC092552.1-201ENST00000547243 906 ntBASIC16.25■□□□□ 0.19
MSI1O43347 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.25■□□□□ 0.19
MSI1O43347 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.25■□□□□ 0.19
MSI1O43347 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MSI1O43347 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.25■□□□□ 0.19
MSI1O43347 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.25■□□□□ 0.19
MSI1O43347 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MSI1O43347 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.25■□□□□ 0.19
MSI1O43347 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSI1O43347 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.24■□□□□ 0.19
MSI1O43347 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.24■□□□□ 0.19
MSI1O43347 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
MSI1O43347 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 AL133267.1-201ENST00000398220 340 ntBASIC16.24■□□□□ 0.19
MSI1O43347 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 AP006294.1-201ENST00000415407 339 ntBASIC16.24■□□□□ 0.19
MSI1O43347 AC005034.1-201ENST00000426657 489 ntBASIC16.24■□□□□ 0.19
MSI1O43347 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.24■□□□□ 0.19
MSI1O43347 VDAC1P7-201ENST00000462417 847 ntBASIC16.24■□□□□ 0.19
MSI1O43347 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.24■□□□□ 0.19
MSI1O43347 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.24■□□□□ 0.19
MSI1O43347 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.24■□□□□ 0.19
MSI1O43347 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.24■□□□□ 0.19
MSI1O43347 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.24■□□□□ 0.19
MSI1O43347 AL049840.4-201ENST00000602422 811 ntBASIC16.24■□□□□ 0.19
MSI1O43347 AC000095.1-201ENST00000603208 874 ntBASIC16.24■□□□□ 0.19
MSI1O43347 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.24■□□□□ 0.19
MSI1O43347 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSI1O43347 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSI1O43347 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms