Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 KRT18P28-201ENST00000453838 1332 ntBASIC16.78■□□□□ 0.28
FOXN3O00409 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FOXN3O00409 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXN3O00409 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXN3O00409 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 SLED1-202ENST00000512051 380 ntBASIC16.78■□□□□ 0.28
FOXN3O00409 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXN3O00409 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXN3O00409 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXN3O00409 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXN3O00409 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 AL109936.8-201ENST00000641772 604 ntBASIC16.78■□□□□ 0.28
FOXN3O00409 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FOXN3O00409 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.77■□□□□ 0.28
FOXN3O00409 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
FOXN3O00409 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
FOXN3O00409 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 AC087499.5-201ENST00000452760 1342 ntBASIC16.77■□□□□ 0.28
FOXN3O00409 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FOXN3O00409 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXN3O00409 CICP11-201ENST00000434745 2827 ntBASIC16.77■□□□□ 0.28
FOXN3O00409 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXN3O00409 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
FOXN3O00409 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
FOXN3O00409 TREML5P-201ENST00000421694 576 ntBASIC16.77■□□□□ 0.28
FOXN3O00409 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXN3O00409 RN7SL618P-201ENST00000477850 296 ntBASIC16.77■□□□□ 0.28
FOXN3O00409 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXN3O00409 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXN3O00409 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXN3O00409 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.77■□□□□ 0.28
FOXN3O00409 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXN3O00409 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXN3O00409 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.77■□□□□ 0.27
FOXN3O00409 AGAP7P-201ENST00000582299 2062 ntBASIC16.77■□□□□ 0.27
FOXN3O00409 AGAP14-201ENST00000624701 2060 ntBASIC16.77■□□□□ 0.27
FOXN3O00409 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXN3O00409 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms