Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC005229.1-201ENST00000392885 409 ntBASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BAATP1-201ENST00000412284 1225 ntBASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC022210.1-201ENST00000449856 793 ntBASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC005252.2-201ENST00000624630 1141 ntBASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL513523.2-202ENST00000427283 2040 ntBASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.64■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.64■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AP001582.1-201ENST00000525856 295 ntBASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AP005482.1-201ENST00000563722 1273 ntBASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AC133552.6-201ENST00000613406 534 ntBASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AP003680.1-201ENST00000598970 3660 ntBASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.63■□□□□ 0.09
C1QTNF3-AMACRE9PGA6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms