Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AC023310.1-201ENST00000554836 735 ntBASIC13.66□□□□□ -0.22
MBD3L3A6NE82 DUX4L45-201ENST00000566406 1057 ntBASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 PCDHB19P-201ENST00000570871 2371 ntBASIC13.65□□□□□ -0.22
MBD3L3A6NE82 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 MIR1908-201ENST00000410394 80 ntBASIC13.65□□□□□ -0.22
MBD3L3A6NE82 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 FAM197Y7-201ENST00000432892 766 ntBASIC13.65□□□□□ -0.22
MBD3L3A6NE82 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AC010328.2-201ENST00000597698 1111 ntBASIC13.65□□□□□ -0.22
MBD3L3A6NE82 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AC007787.1-201ENST00000588095 1583 ntBASIC13.65□□□□□ -0.22
MBD3L3A6NE82 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MBD3L3A6NE82 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.65□□□□□ -0.23
MBD3L3A6NE82 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms