Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 USP32P1-208ENST00000506594 1164 ntBASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 AC009486.1-201ENST00000569860 813 ntBASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 COX11-210ENST00000639671 696 ntBASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDP1Q9Y5B0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 LTB4R2-202ENST00000528054 3092 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 BCRP2-202ENST00000447763 634 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 BCRP6-201ENST00000510112 632 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 BCRP7-201ENST00000511549 544 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 MIR6775-201ENST00000617557 69 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDP1Q9Y5B0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 KLF2P4-201ENST00000451959 1225 ntBASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms