Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 FER1L4-210ENST00000615531 5998 ntBASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AP003680.1-201ENST00000598970 3660 ntBASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC023824.1-201ENST00000562945 2975 ntBASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC234783.1-201ENST00000441761 496 ntBASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC036164.1-201ENST00000570544 333 ntBASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AL033527.5-201ENST00000641382 801 ntBASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXD3Q9UJU5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 CICP13-201ENST00000422015 2789 ntBASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 AL607033.1-201ENST00000623900 1599 ntBASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXD3Q9UJU5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 AP005482.1-201ENST00000563722 1273 ntBASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 MIR8072-201ENST00000614241 80 ntBASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms