Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.56■□□□□ 0.24
TLR9Q9NR96 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR9Q9NR96 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR9Q9NR96 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TLR9Q9NR96 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR9Q9NR96 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TLR9Q9NR96 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TLR9Q9NR96 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TLR9Q9NR96 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.56■□□□□ 0.24
TLR9Q9NR96 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 MIR1202-201ENST00000408529 83 ntBASIC16.55■□□□□ 0.24
TLR9Q9NR96 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 GAPDHP40-201ENST00000505218 1006 ntBASIC16.55■□□□□ 0.24
TLR9Q9NR96 RNA5SP486-201ENST00000515961 83 ntBASIC16.55■□□□□ 0.24
TLR9Q9NR96 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 AL138799.1-201ENST00000448213 1675 ntBASIC16.55■□□□□ 0.24
TLR9Q9NR96 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TLR9Q9NR96 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR9Q9NR96 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 HOMER2P2-201ENST00000451621 847 ntBASIC16.54■□□□□ 0.24
TLR9Q9NR96 AL590640.2-201ENST00000457038 527 ntBASIC16.54■□□□□ 0.24
TLR9Q9NR96 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 AC106872.11-201ENST00000605838 421 ntBASIC16.54■□□□□ 0.24
TLR9Q9NR96 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 BX539320.1-201ENST00000623759 877 ntBASIC16.54■□□□□ 0.24
TLR9Q9NR96 AC006453.4-201ENST00000636949 1252 ntBASIC16.54■□□□□ 0.24
TLR9Q9NR96 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TLR9Q9NR96 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TLR9Q9NR96 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms