Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH11XQ9BZA7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 NKAIN1P1-201ENST00000435754 582 ntBASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 AL391280.1-201ENST00000506969 1062 ntBASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 AC106820.3-201ENST00000561653 397 ntBASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH11XQ9BZA7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 HIST2H2BB-201ENST00000449108 381 ntBASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 AC022616.1-201ENST00000518688 554 ntBASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 AC005730.2-201ENST00000564549 1184 ntBASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 SAMD11P1-201ENST00000571429 661 ntBASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 AC091812.3-201ENST00000621362 345 ntBASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 KRT8P19-201ENST00000551916 1455 ntBASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH11XQ9BZA7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AP001002.3-201ENST00000623482 206 ntBASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 KRT8P4-201ENST00000509735 1454 ntBASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH11XQ9BZA7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 AL354877.1-201ENST00000424412 413 ntBASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms