Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AL136982.4-201ENST00000437689 1740 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AL645939.2-201ENST00000427340 991 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 KRT18P67-201ENST00000432816 1264 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC009947.1-201ENST00000444350 727 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 EMBP1-201ENST00000458200 901 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC092910.1-201ENST00000482027 1129 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SNORA48.9-201ENST00000516419 162 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AL049840.3-201ENST00000602669 611 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC117489.1-201ENST00000625169 3217 ntBASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms