Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 AC016694.1-201ENST00000434179 700 ntBASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ACTBP11-201ENST00000436287 1126 ntBASIC16.3■□□□□ 0.2
LRRC3Q9BY71 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 MIR4538-201ENST00000581377 78 ntBASIC16.3■□□□□ 0.2
LRRC3Q9BY71 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3Q9BY71 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms