Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AC105233.2-201ENST00000523697 349 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AF228730.5-201ENST00000530288 346 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AC243562.1-201ENST00000560672 389 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 MIR4321-201ENST00000592276 80 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 MTDHP5-201ENST00000598980 586 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 C20orf181-201ENST00000623918 480 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 AC008267.7-201ENST00000624570 1194 ntBASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHRDL1Q9BU40 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC007292.2-201ENST00000593524 1812 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC006486.2-201ENST00000624246 2199 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SPDYE11-202ENST00000450699 704 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 RN7SL589P-201ENST00000481268 310 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 ALG1L5P-201ENST00000482043 771 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC098859.1-201ENST00000502915 1238 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 KRT8P48-201ENST00000515599 1220 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SPDYE9P-201ENST00000570642 692 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SPDYE10P-202ENST00000612005 668 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SPDYE8P-202ENST00000612377 668 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SPTSSB-204ENST00000617024 1292 ntBASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms