Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 AC022532.1-201ENST00000624563 1728 ntBASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 AZGP1P1-201ENST00000411909 902 ntBASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 LINC00628-201ENST00000628516 1289 ntBASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YIPF4Q9BSR8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 AL139400.1-201ENST00000366220 510 ntBASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 RN7SL828P-201ENST00000607615 303 ntBASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 PCDHA3-202ENST00000532566 4594 ntBASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
YIPF4Q9BSR8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms