Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN18Q99952 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN18Q99952 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN18Q99952 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN18Q99952 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN18Q99952 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN18Q99952 AL353770.1-201ENST00000614915 403 ntBASIC17.69■□□□□ 0.42
PTPN18Q99952 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN18Q99952 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN18Q99952 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN18Q99952 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN18Q99952 FLJ38576-201ENST00000623820 2459 ntBASIC17.69■□□□□ 0.42
PTPN18Q99952 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN18Q99952 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN18Q99952 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 MIR648-201ENST00000385046 94 ntBASIC17.68■□□□□ 0.42
PTPN18Q99952 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN18Q99952 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN18Q99952 MARK2P5-201ENST00000507649 634 ntBASIC17.68■□□□□ 0.42
PTPN18Q99952 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN18Q99952 RN7SL163P-201ENST00000583100 276 ntBASIC17.68■□□□□ 0.42
PTPN18Q99952 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN18Q99952 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN18Q99952 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 AC020922.3-201ENST00000595064 547 ntBASIC17.68■□□□□ 0.42
PTPN18Q99952 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN18Q99952 AC068587.8-201ENST00000641239 219 ntBASIC17.68■□□□□ 0.42
PTPN18Q99952 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN18Q99952 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN18Q99952 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN18Q99952 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN18Q99952 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN18Q99952 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 AL136309.1-201ENST00000403917 691 ntBASIC17.67■□□□□ 0.42
PTPN18Q99952 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 AC004066.1-201ENST00000502488 802 ntBASIC17.67■□□□□ 0.42
PTPN18Q99952 AC106794.1-201ENST00000506935 792 ntBASIC17.67■□□□□ 0.42
PTPN18Q99952 AC004466.1-201ENST00000599515 1080 ntBASIC17.67■□□□□ 0.42
PTPN18Q99952 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 AC011491.1-203ENST00000637688 543 ntBASIC17.67■□□□□ 0.42
PTPN18Q99952 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN18Q99952 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN18Q99952 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN18Q99952 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PTPN18Q99952 FGFR3P1-201ENST00000449999 601 ntBASIC17.66■□□□□ 0.42
PTPN18Q99952 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN18Q99952 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN18Q99952 AC005324.6-201ENST00000587972 613 ntBASIC17.66■□□□□ 0.42
PTPN18Q99952 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.66■□□□□ 0.42
PTPN18Q99952 HLA-C-210ENST00000640219 976 ntBASIC17.66■□□□□ 0.42
PTPN18Q99952 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN18Q99952 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN18Q99952 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN18Q99952 CLUHP2-201ENST00000426660 1303 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms