Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 DRD5P1-201ENST00000456605 1438 ntBASIC15.72■□□□□ 0.11
SIPA1Q96FS4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 AC016694.1-201ENST00000434179 700 ntBASIC15.72■□□□□ 0.11
SIPA1Q96FS4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 FO681548.1-201ENST00000455617 1132 ntBASIC15.72■□□□□ 0.11
SIPA1Q96FS4 FTH1P14-201ENST00000482930 551 ntBASIC15.72■□□□□ 0.11
SIPA1Q96FS4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 FAM21FP-201ENST00000426241 1131 ntBASIC15.71■□□□□ 0.11
SIPA1Q96FS4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 AP000812.2-201ENST00000538934 718 ntBASIC15.71■□□□□ 0.11
SIPA1Q96FS4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 RN7SL219P-201ENST00000582872 296 ntBASIC15.71■□□□□ 0.11
SIPA1Q96FS4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIPA1Q96FS4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.71■□□□□ 0.1
SIPA1Q96FS4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SIPA1Q96FS4 AC092364.2-201ENST00000596710 2692 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms