Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 CLK3P2-201ENST00000427566 1453 ntBASIC15.21■□□□□ 0.03
RNF31Q96EP0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 AL512384.1-201ENST00000406683 331 ntBASIC15.21■□□□□ 0.03
RNF31Q96EP0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 ARSEP1-201ENST00000420443 635 ntBASIC15.21■□□□□ 0.03
RNF31Q96EP0 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF31Q96EP0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RNF31Q96EP0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF31Q96EP0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF31Q96EP0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF31Q96EP0 BTBD7P1-201ENST00000447253 1453 ntBASIC15.2■□□□□ 0.02
RNF31Q96EP0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 AC112492.5-201ENST00000421897 457 ntBASIC15.2■□□□□ 0.02
RNF31Q96EP0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 KRT18P64-201ENST00000434946 1219 ntBASIC15.2■□□□□ 0.02
RNF31Q96EP0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 AC093004.1-201ENST00000508850 424 ntBASIC15.2■□□□□ 0.02
RNF31Q96EP0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 AC055876.2-201ENST00000531834 546 ntBASIC15.2■□□□□ 0.02
RNF31Q96EP0 CR383656.12-201ENST00000549567 513 ntBASIC15.2■□□□□ 0.02
RNF31Q96EP0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF31Q96EP0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF31Q96EP0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF31Q96EP0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF31Q96EP0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF31Q96EP0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RNF31Q96EP0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms