Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC087499.6-201ENST00000411576 835 ntBASIC13.93□□□□□ -0.18
APH1AQ96BI3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 AL589987.1-201ENST00000453380 819 ntBASIC13.93□□□□□ -0.18
APH1AQ96BI3 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 AC055876.2-201ENST00000531834 546 ntBASIC13.93□□□□□ -0.18
APH1AQ96BI3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.93□□□□□ -0.18
APH1AQ96BI3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APH1AQ96BI3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 TOMM22P5-201ENST00000416399 439 ntBASIC13.92□□□□□ -0.18
APH1AQ96BI3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AL353779.1-201ENST00000434793 351 ntBASIC13.92□□□□□ -0.18
APH1AQ96BI3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC138969.3-201ENST00000546612 1459 ntBASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC138932.2-201ENST00000548268 1459 ntBASIC13.92□□□□□ -0.18
APH1AQ96BI3 AC126755.4-201ENST00000549796 1459 ntBASIC13.92□□□□□ -0.18
APH1AQ96BI3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APH1AQ96BI3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
APH1AQ96BI3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 AC022188.1-201ENST00000620960 1664 ntBASIC13.91□□□□□ -0.18
APH1AQ96BI3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.91□□□□□ -0.18
APH1AQ96BI3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 KRT18P64-201ENST00000434946 1219 ntBASIC13.91□□□□□ -0.18
APH1AQ96BI3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APH1AQ96BI3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.91□□□□□ -0.18
APH1AQ96BI3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms