Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 KRT18P58-201ENST00000527480 1120 ntBASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 AC018845.2-201ENST00000568326 409 ntBASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 PMS2P7-201ENST00000506558 1336 ntBASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3C3Q8NEB9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AL137784.3-201ENST00000623858 2288 ntBASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AC140658.5-201ENST00000438532 169 ntBASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AC025580.3-201ENST00000617932 1424 ntBASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.8□□□□□ -0.04
PIK3C3Q8NEB9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PIK3C3Q8NEB9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms