Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 BANF1P1-201ENST00000553684 263 ntBASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 SNHG9-202ENST00000564014 471 ntBASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 RN7SL828P-201ENST00000607615 303 ntBASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 AL109954.1-202ENST00000564051 2148 ntBASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AC103702.1-201ENST00000548801 2630 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AL035456.1-201ENST00000456064 1369 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AC254562.1-201ENST00000417586 456 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 CNN2P11-201ENST00000429351 262 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 HNRNPUP1-201ENST00000554987 333 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 MIR4453-201ENST00000584019 89 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 AC007967.4-201ENST00000614700 386 ntBASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DNAAF3Q8N9W5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.02■□□□□ 0.16
DNAAF3Q8N9W5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms