Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC026150.2-201ENST00000564693 1156 ntBASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AC211486.1-202ENST00000416371 468 ntBASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AC211476.1-201ENST00000503899 468 ntBASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 MIR6080-201ENST00000617359 66 ntBASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 AL607033.1-201ENST00000623900 1599 ntBASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00346Q8IVM7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms