Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 AP001094.4-201ENST00000579008 2176 ntBASIC19.35■□□□□ 0.69
COL23A1Q86Y22 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 AC132192.2-201ENST00000596206 1147 ntBASIC19.35■□□□□ 0.69
COL23A1Q86Y22 AP001065.2-201ENST00000617205 644 ntBASIC19.35■□□□□ 0.69
COL23A1Q86Y22 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 FZD10-202ENST00000539839 3282 ntBASIC19.35■□□□□ 0.69
COL23A1Q86Y22 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 HTR7P1-202ENST00000624664 4411 ntBASIC19.34■□□□□ 0.69
COL23A1Q86Y22 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 GHSR-202ENST00000427970 912 ntBASIC19.34■□□□□ 0.69
COL23A1Q86Y22 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 MIR6842-201ENST00000612539 65 ntBASIC19.34■□□□□ 0.69
COL23A1Q86Y22 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL23A1Q86Y22 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 AC011477.6-201ENST00000604980 1927 ntBASIC19.33■□□□□ 0.69
COL23A1Q86Y22 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 CLUHP2-201ENST00000426660 1303 ntBASIC19.33■□□□□ 0.69
COL23A1Q86Y22 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 AL645608.8-201ENST00000606034 2086 ntBASIC19.33■□□□□ 0.69
COL23A1Q86Y22 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL23A1Q86Y22 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 AC073150.1-201ENST00000450406 1084 ntBASIC19.33■□□□□ 0.68
COL23A1Q86Y22 AC004066.1-201ENST00000502488 802 ntBASIC19.33■□□□□ 0.68
COL23A1Q86Y22 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 AC004466.1-201ENST00000599515 1080 ntBASIC19.33■□□□□ 0.68
COL23A1Q86Y22 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 AC138466.3-201ENST00000619983 221 ntBASIC19.33■□□□□ 0.68
COL23A1Q86Y22 YRDCP1-201ENST00000621419 643 ntBASIC19.33■□□□□ 0.68
COL23A1Q86Y22 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL23A1Q86Y22 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms