Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC004877.2-201ENST00000623941 599 ntBASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 AC140479.7-201ENST00000636301 2332 ntBASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 KRT8P37-201ENST00000451609 1420 ntBASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 EEF1DP4-201ENST00000446006 880 ntBASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 RNA5SP415-201ENST00000517246 115 ntBASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 AC116407.3-201ENST00000623905 1129 ntBASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LRRTM1Q86UE6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 BCAR1-209ENST00000546196 1340 ntBASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 CICP14-201ENST00000629111 2732 ntBASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms