Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13□□□□□ -0.33
TREML4Q6UXN2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
TREML4Q6UXN2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13□□□□□ -0.33
TREML4Q6UXN2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13□□□□□ -0.33
TREML4Q6UXN2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TREML4Q6UXN2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13□□□□□ -0.33
TREML4Q6UXN2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13□□□□□ -0.33
TREML4Q6UXN2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC138969.3-201ENST00000546612 1459 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC138932.2-201ENST00000548268 1459 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC126755.4-201ENST00000549796 1459 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 MIR4515-201ENST00000584082 81 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AL022328.3-201ENST00000607943 679 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AC020763.2-201ENST00000623155 1255 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AL590560.3-201ENST00000623350 461 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 AP001350.2-201ENST00000625104 1094 ntBASIC12.99□□□□□ -0.33
TREML4Q6UXN2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TREML4Q6UXN2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 AP003680.1-201ENST00000598970 3660 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 AC098614.1-201ENST00000368528 745 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 SPTLC1P1-201ENST00000447199 261 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 AL049829.1-201ENST00000465411 156 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 GIMAP3P-201ENST00000495150 836 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 MIR4453-201ENST00000584019 89 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 RPAP2P1-201ENST00000603626 1168 ntBASIC12.98□□□□□ -0.33
TREML4Q6UXN2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREML4Q6UXN2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms