Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
UBA52P62987 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 PMS2P4-201ENST00000412466 1052 ntBASIC13.66□□□□□ -0.22
UBA52P62987 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 AC244107.1-201ENST00000442033 332 ntBASIC13.66□□□□□ -0.22
UBA52P62987 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 AC087163.2-201ENST00000457299 853 ntBASIC13.66□□□□□ -0.22
UBA52P62987 SLC25A6P2-201ENST00000497974 877 ntBASIC13.66□□□□□ -0.22
UBA52P62987 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 RNA5SP421-201ENST00000516864 134 ntBASIC13.66□□□□□ -0.22
UBA52P62987 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 AC093520.2-201ENST00000561830 333 ntBASIC13.66□□□□□ -0.22
UBA52P62987 AC138761.1-201ENST00000584393 385 ntBASIC13.66□□□□□ -0.22
UBA52P62987 AC015911.4-201ENST00000588022 1070 ntBASIC13.66□□□□□ -0.22
UBA52P62987 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 Z92544.3-201ENST00000624747 417 ntBASIC13.66□□□□□ -0.22
UBA52P62987 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
UBA52P62987 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 AC067750.1-201ENST00000608826 6545 ntBASIC13.65□□□□□ -0.22
UBA52P62987 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 CNN2P2-201ENST00000443536 909 ntBASIC13.65□□□□□ -0.22
UBA52P62987 CNN2P3-201ENST00000450201 906 ntBASIC13.65□□□□□ -0.22
UBA52P62987 AC093214.1-201ENST00000511688 1107 ntBASIC13.65□□□□□ -0.22
UBA52P62987 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.65□□□□□ -0.22
UBA52P62987 AC069262.1-201ENST00000539058 672 ntBASIC13.65□□□□□ -0.22
UBA52P62987 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.65□□□□□ -0.22
UBA52P62987 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.65□□□□□ -0.22
UBA52P62987 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.65□□□□□ -0.22
UBA52P62987 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 AL136317.3-201ENST00000618497 906 ntBASIC13.65□□□□□ -0.22
UBA52P62987 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.65□□□□□ -0.22
UBA52P62987 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms