Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
FOXG1P55316 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.72□□□□□ -0.21
FOXG1P55316 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.72□□□□□ -0.21
FOXG1P55316 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.72□□□□□ -0.21
FOXG1P55316 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 AC092552.1-201ENST00000547243 906 ntBASIC13.72□□□□□ -0.21
FOXG1P55316 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 AC000095.1-201ENST00000603208 874 ntBASIC13.72□□□□□ -0.21
FOXG1P55316 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
FOXG1P55316 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.72□□□□□ -0.21
FOXG1P55316 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FOXG1P55316 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
FOXG1P55316 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXG1P55316 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXG1P55316 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXG1P55316 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXG1P55316 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXG1P55316 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXG1P55316 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
FOXG1P55316 AL133267.1-201ENST00000398220 340 ntBASIC13.71□□□□□ -0.21
FOXG1P55316 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXG1P55316 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXG1P55316 VDAC1P7-201ENST00000462417 847 ntBASIC13.71□□□□□ -0.21
FOXG1P55316 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.71□□□□□ -0.21
FOXG1P55316 AC104596.2-201ENST00000512793 793 ntBASIC13.71□□□□□ -0.21
FOXG1P55316 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.71□□□□□ -0.21
FOXG1P55316 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
FOXG1P55316 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 TMEM261P1-201ENST00000604899 340 ntBASIC13.71□□□□□ -0.21
FOXG1P55316 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 AC105917.1-201ENST00000506637 2539 ntBASIC13.71□□□□□ -0.21
FOXG1P55316 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXG1P55316 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXG1P55316 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.71□□□□□ -0.22
FOXG1P55316 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.71□□□□□ -0.22
FOXG1P55316 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
FOXG1P55316 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
FOXG1P55316 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
FOXG1P55316 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms