Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
BRPF1P55201 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BRPF1P55201 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRPF1P55201 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.91■□□□□ 0.78
BRPF1P55201 GHSR-202ENST00000427970 912 ntBASIC19.91■□□□□ 0.78
BRPF1P55201 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 DOC2GP-202ENST00000514950 1163 ntBASIC19.91■□□□□ 0.78
BRPF1P55201 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.91■□□□□ 0.78
BRPF1P55201 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.91■□□□□ 0.78
BRPF1P55201 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.91■□□□□ 0.78
BRPF1P55201 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.91■□□□□ 0.78
BRPF1P55201 AC025181.2-201ENST00000606994 802 ntBASIC19.91■□□□□ 0.78
BRPF1P55201 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
BRPF1P55201 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BRPF1P55201 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
BRPF1P55201 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.91■□□□□ 0.78
BRPF1P55201 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BRPF1P55201 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRPF1P55201 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.91■□□□□ 0.78
BRPF1P55201 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 AC023310.3-201ENST00000557027 670 ntBASIC19.9■□□□□ 0.78
BRPF1P55201 AC100756.1-201ENST00000562736 682 ntBASIC19.9■□□□□ 0.78
BRPF1P55201 AC138749.3-201ENST00000567691 622 ntBASIC19.9■□□□□ 0.78
BRPF1P55201 AC140912.1-201ENST00000577171 1054 ntBASIC19.9■□□□□ 0.78
BRPF1P55201 AC116165.1-201ENST00000611806 668 ntBASIC19.9■□□□□ 0.78
BRPF1P55201 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRPF1P55201 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRPF1P55201 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
BRPF1P55201 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRPF1P55201 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRPF1P55201 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
BRPF1P55201 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
BRPF1P55201 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRPF1P55201 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRPF1P55201 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRPF1P55201 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
BRPF1P55201 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 MIR658-201ENST00000385210 100 ntBASIC19.89■□□□□ 0.77
BRPF1P55201 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRPF1P55201 MEP1AP4-201ENST00000423244 1087 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms