Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLCN4P51793 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN4P51793 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN4P51793 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN4P51793 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN4P51793 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLCN4P51793 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN4P51793 DOC2GP-204ENST00000639052 2548 ntBASIC16.41■□□□□ 0.22
CLCN4P51793 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN4P51793 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
CLCN4P51793 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 AL662844.4-201ENST00000606367 2838 ntBASIC16.4■□□□□ 0.22
CLCN4P51793 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCN4P51793 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCN4P51793 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.4■□□□□ 0.22
CLCN4P51793 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.4■□□□□ 0.22
CLCN4P51793 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCN4P51793 AL022328.3-201ENST00000607943 679 ntBASIC16.4■□□□□ 0.22
CLCN4P51793 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN4P51793 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN4P51793 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN4P51793 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN4P51793 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN4P51793 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN4P51793 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 AC092364.2-201ENST00000596710 2692 ntBASIC16.39■□□□□ 0.21
CLCN4P51793 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CLCN4P51793 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLCN4P51793 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLCN4P51793 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCN4P51793 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN4P51793 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCN4P51793 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN4P51793 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN4P51793 MIR4313-201ENST00000580760 101 ntBASIC16.39■□□□□ 0.21
CLCN4P51793 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN4P51793 BX539320.1-201ENST00000623759 877 ntBASIC16.39■□□□□ 0.21
CLCN4P51793 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN4P51793 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN4P51793 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN4P51793 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN4P51793 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN4P51793 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN4P51793 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN4P51793 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN4P51793 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN4P51793 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN4P51793 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN4P51793 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN4P51793 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN4P51793 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLCN4P51793 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLCN4P51793 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CLCN4P51793 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN4P51793 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms