Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC005336.2-201ENST00000593183 939 ntBASIC18.42■□□□□ 0.54
MRE11P49959 AL606495.2-201ENST00000605867 535 ntBASIC18.42■□□□□ 0.54
MRE11P49959 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.42■□□□□ 0.54
MRE11P49959 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MRE11P49959 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
MRE11P49959 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRE11P49959 REXO1L1P-202ENST00000608646 1974 ntBASIC18.42■□□□□ 0.54
MRE11P49959 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.42■□□□□ 0.54
MRE11P49959 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.42■□□□□ 0.54
MRE11P49959 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRE11P49959 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRE11P49959 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.42■□□□□ 0.54
MRE11P49959 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRE11P49959 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRE11P49959 LINC01230-201ENST00000625222 3017 ntBASIC18.41■□□□□ 0.54
MRE11P49959 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 AC011477.6-201ENST00000604980 1927 ntBASIC18.41■□□□□ 0.54
MRE11P49959 AC136759.1-202ENST00000530858 2194 ntBASIC18.41■□□□□ 0.54
MRE11P49959 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.41■□□□□ 0.54
MRE11P49959 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.41■□□□□ 0.54
MRE11P49959 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 PRSS29P-201ENST00000440800 595 ntBASIC18.41■□□□□ 0.54
MRE11P49959 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.41■□□□□ 0.54
MRE11P49959 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.41■□□□□ 0.54
MRE11P49959 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.41■□□□□ 0.54
MRE11P49959 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.41■□□□□ 0.54
MRE11P49959 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 AC093512.1-201ENST00000617969 520 ntBASIC18.41■□□□□ 0.54
MRE11P49959 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MRE11P49959 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
MRE11P49959 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.41■□□□□ 0.54
MRE11P49959 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRE11P49959 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MRE11P49959 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.4■□□□□ 0.54
MRE11P49959 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MRE11P49959 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 OR2I1P-209ENST00000641730 5365 ntBASIC18.4■□□□□ 0.54
MRE11P49959 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MRE11P49959 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.4■□□□□ 0.54
MRE11P49959 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MRE11P49959 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.4■□□□□ 0.54
MRE11P49959 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC18.4■□□□□ 0.54
MRE11P49959 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.4■□□□□ 0.54
MRE11P49959 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.4■□□□□ 0.54
MRE11P49959 UNC93B6-202ENST00000528242 690 ntBASIC18.4■□□□□ 0.54
MRE11P49959 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.4■□□□□ 0.54
MRE11P49959 AC021087.4-201ENST00000563761 564 ntBASIC18.4■□□□□ 0.54
MRE11P49959 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.4■□□□□ 0.54
MRE11P49959 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.4■□□□□ 0.54
MRE11P49959 AL359881.2-201ENST00000602973 570 ntBASIC18.4■□□□□ 0.54
MRE11P49959 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MRE11P49959 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 AC148477.5-201ENST00000625164 1645 ntBASIC18.4■□□□□ 0.54
MRE11P49959 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.4■□□□□ 0.54
MRE11P49959 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MRE11P49959 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MRE11P49959 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.4■□□□□ 0.54
MRE11P49959 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 REXO1L2P-201ENST00000425429 2069 ntBASIC18.4■□□□□ 0.54
MRE11P49959 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
MRE11P49959 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRE11P49959 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MRE11P49959 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms