Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC025271.4-201ENST00000621477 1726 ntBASIC17.32■□□□□ 0.36
CENPFP49454 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPFP49454 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.32■□□□□ 0.36
CENPFP49454 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 POU5F1P6-201ENST00000466990 990 ntBASIC17.32■□□□□ 0.36
CENPFP49454 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 RTN3P1-201ENST00000536295 711 ntBASIC17.32■□□□□ 0.36
CENPFP49454 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.32■□□□□ 0.36
CENPFP49454 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.32■□□□□ 0.36
CENPFP49454 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.32■□□□□ 0.36
CENPFP49454 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPFP49454 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.32■□□□□ 0.36
CENPFP49454 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.32■□□□□ 0.36
CENPFP49454 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CENPFP49454 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPFP49454 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPFP49454 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CENPFP49454 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 ACTBP8-201ENST00000403258 1108 ntBASIC17.31■□□□□ 0.36
CENPFP49454 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.31■□□□□ 0.36
CENPFP49454 AC005740.2-201ENST00000511085 419 ntBASIC17.31■□□□□ 0.36
CENPFP49454 AL353770.1-201ENST00000614915 403 ntBASIC17.31■□□□□ 0.36
CENPFP49454 AC103691.2-201ENST00000618824 433 ntBASIC17.31■□□□□ 0.36
CENPFP49454 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CENPFP49454 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPFP49454 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.31■□□□□ 0.36
CENPFP49454 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 AP001002.3-201ENST00000623482 206 ntBASIC17.31■□□□□ 0.36
CENPFP49454 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.31■□□□□ 0.36
CENPFP49454 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
CENPFP49454 LTB4R2-202ENST00000528054 3092 ntBASIC17.31■□□□□ 0.36
CENPFP49454 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CENPFP49454 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.3■□□□□ 0.36
CENPFP49454 AC012044.1-201ENST00000603431 297 ntBASIC17.3■□□□□ 0.36
CENPFP49454 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.3■□□□□ 0.36
CENPFP49454 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.3■□□□□ 0.36
CENPFP49454 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.3■□□□□ 0.36
CENPFP49454 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.3■□□□□ 0.36
CENPFP49454 AL157792.1-201ENST00000488281 530 ntBASIC17.3■□□□□ 0.36
CENPFP49454 TMCO5B-205ENST00000530020 894 ntBASIC17.3■□□□□ 0.36
CENPFP49454 AC027139.1-201ENST00000565286 951 ntBASIC17.3■□□□□ 0.36
CENPFP49454 MIR4783-201ENST00000580343 82 ntBASIC17.3■□□□□ 0.36
CENPFP49454 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.3■□□□□ 0.36
CENPFP49454 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 AC020910.5-201ENST00000623668 1865 ntBASIC17.3■□□□□ 0.36
CENPFP49454 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CENPFP49454 MST1L-201ENST00000442552 2185 ntBASIC17.3■□□□□ 0.36
CENPFP49454 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.3■□□□□ 0.36
CENPFP49454 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 RN7SKP214-201ENST00000364208 315 ntBASIC17.3■□□□□ 0.36
CENPFP49454 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.3■□□□□ 0.36
CENPFP49454 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.3■□□□□ 0.36
CENPFP49454 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.3■□□□□ 0.36
CENPFP49454 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPFP49454 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.29■□□□□ 0.36
CENPFP49454 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 PIN4P1-201ENST00000451079 396 ntBASIC17.29■□□□□ 0.36
CENPFP49454 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.29■□□□□ 0.36
CENPFP49454 AL118516.1-201ENST00000564152 670 ntBASIC17.29■□□□□ 0.36
CENPFP49454 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.29■□□□□ 0.36
CENPFP49454 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 AL450472.2-201ENST00000603663 1156 ntBASIC17.29■□□□□ 0.36
CENPFP49454 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.29■□□□□ 0.36
CENPFP49454 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CENPFP49454 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.29■□□□□ 0.36
CENPFP49454 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 KRT8P14-201ENST00000414254 1442 ntBASIC17.29■□□□□ 0.36
CENPFP49454 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms