Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A3P47895 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A3P47895 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A3P47895 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A3P47895 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A3P47895 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
ALDH1A3P47895 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ALDH1A3P47895 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 AL607033.1-201ENST00000623900 1599 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 AC134915.1-201ENST00000426461 574 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 AC007274.1-201ENST00000439805 662 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 AC234783.1-201ENST00000441761 496 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 BRI3BPP1-201ENST00000594224 787 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 AC008735.3-201ENST00000596646 500 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 AC097359.3-201ENST00000603982 1210 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 FLJ16779-201ENST00000612722 7638 ntBASIC16.6■□□□□ 0.25
ALDH1A3P47895 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A3P47895 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A3P47895 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 AC011477.6-201ENST00000604980 1927 ntBASIC16.59■□□□□ 0.25
ALDH1A3P47895 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 AL359711.2-201ENST00000563105 872 ntBASIC16.59■□□□□ 0.25
ALDH1A3P47895 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.59■□□□□ 0.25
ALDH1A3P47895 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A3P47895 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A3P47895 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms