Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 AC112693.3-201ENST00000624819 1983 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HMGCLP35914 AC236430.1-201ENST00000402231 743 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.59■□□□□ 0.09
HMGCLP35914 DFFBP1-201ENST00000433250 979 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HMGCLP35914 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.59■□□□□ 0.09
HMGCLP35914 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.59■□□□□ 0.09
HMGCLP35914 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
HMGCLP35914 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCLP35914 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
HMGCLP35914 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 AC092384.3-202ENST00000564646 2873 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 SLC7A15P-201ENST00000424028 1363 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 AL391825.1-201ENST00000457671 1364 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HMGCLP35914 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCLP35914 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 CLK3P2-201ENST00000427566 1453 ntBASIC15.59■□□□□ 0.09
HMGCLP35914 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.58■□□□□ 0.09
HMGCLP35914 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.58■□□□□ 0.09
HMGCLP35914 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.58■□□□□ 0.09
HMGCLP35914 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCLP35914 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCLP35914 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCLP35914 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.58■□□□□ 0.09
HMGCLP35914 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCLP35914 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HMGCLP35914 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCLP35914 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCLP35914 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCLP35914 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HMGCLP35914 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.58■□□□□ 0.08
HMGCLP35914 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCLP35914 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.58■□□□□ 0.08
HMGCLP35914 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.58■□□□□ 0.08
HMGCLP35914 AC036164.1-201ENST00000570544 333 ntBASIC15.58■□□□□ 0.08
HMGCLP35914 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HMGCLP35914 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCLP35914 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCLP35914 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCLP35914 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCLP35914 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
HMGCLP35914 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCLP35914 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HMGCLP35914 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCLP35914 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms