Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
PDE6BP35913 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDE6BP35913 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.12■□□□□ 0.65
PDE6BP35913 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDE6BP35913 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 AC091046.1-201ENST00000331871 207 ntBASIC19.12■□□□□ 0.65
PDE6BP35913 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.12■□□□□ 0.65
PDE6BP35913 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.12■□□□□ 0.65
PDE6BP35913 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.12■□□□□ 0.65
PDE6BP35913 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.12■□□□□ 0.65
PDE6BP35913 TNRC18P3-201ENST00000441896 2691 ntBASIC19.12■□□□□ 0.65
PDE6BP35913 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDE6BP35913 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PDE6BP35913 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDE6BP35913 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDE6BP35913 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDE6BP35913 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE6BP35913 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
PDE6BP35913 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE6BP35913 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.11■□□□□ 0.65
PDE6BP35913 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.11■□□□□ 0.65
PDE6BP35913 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.11■□□□□ 0.65
PDE6BP35913 AC004066.1-201ENST00000502488 802 ntBASIC19.11■□□□□ 0.65
PDE6BP35913 RN7SL774P-201ENST00000577467 290 ntBASIC19.11■□□□□ 0.65
PDE6BP35913 U62317.3-201ENST00000608319 855 ntBASIC19.11■□□□□ 0.65
PDE6BP35913 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PDE6BP35913 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.11■□□□□ 0.65
PDE6BP35913 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDE6BP35913 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6BP35913 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6BP35913 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 KRT8P14-201ENST00000414254 1442 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6BP35913 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 MIR33B-201ENST00000385104 96 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.1■□□□□ 0.65
PDE6BP35913 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.1■□□□□ 0.65
PDE6BP35913 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.1■□□□□ 0.65
PDE6BP35913 LDHBP1-201ENST00000455730 1119 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 RN7SL11P-201ENST00000471305 293 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 OR10B1P-201ENST00000601666 907 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 AC073413.1-201ENST00000603927 732 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 AC091544.8-201ENST00000619490 361 ntBASIC19.1■□□□□ 0.65
PDE6BP35913 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6BP35913 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PDE6BP35913 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE6BP35913 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6BP35913 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms