Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.79■□□□□ 0.92
USP6P35125 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.79■□□□□ 0.92
USP6P35125 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.79■□□□□ 0.92
USP6P35125 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.79■□□□□ 0.92
USP6P35125 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.79■□□□□ 0.92
USP6P35125 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
USP6P35125 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
USP6P35125 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.79■□□□□ 0.92
USP6P35125 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.79■□□□□ 0.92
USP6P35125 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.79■□□□□ 0.92
USP6P35125 TNRC18P3-201ENST00000441896 2691 ntBASIC20.79■□□□□ 0.92
USP6P35125 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.79■□□□□ 0.92
USP6P35125 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.79■□□□□ 0.92
USP6P35125 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.79■□□□□ 0.92
USP6P35125 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USP6P35125 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
USP6P35125 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.78■□□□□ 0.92
USP6P35125 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.78■□□□□ 0.92
USP6P35125 AC100850.1-201ENST00000506768 649 ntBASIC20.78■□□□□ 0.92
USP6P35125 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.78■□□□□ 0.92
USP6P35125 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
USP6P35125 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.78■□□□□ 0.92
USP6P35125 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.78■□□□□ 0.92
USP6P35125 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP6P35125 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
USP6P35125 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.78■□□□□ 0.92
USP6P35125 MESTP3-201ENST00000503460 968 ntBASIC20.78■□□□□ 0.92
USP6P35125 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 MIR4783-201ENST00000580343 82 ntBASIC20.78■□□□□ 0.92
USP6P35125 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.78■□□□□ 0.92
USP6P35125 AC022748.3-201ENST00000621828 275 ntBASIC20.78■□□□□ 0.92
USP6P35125 AC026471.1-201ENST00000564629 3026 ntBASIC20.78■□□□□ 0.92
USP6P35125 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP6P35125 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.77■□□□□ 0.92
USP6P35125 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 AC092127.1-201ENST00000567093 3455 ntBASIC20.77■□□□□ 0.92
USP6P35125 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
USP6P35125 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.77■□□□□ 0.92
USP6P35125 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
USP6P35125 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6P35125 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6P35125 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.77■□□□□ 0.91
USP6P35125 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.77■□□□□ 0.91
USP6P35125 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6P35125 EIF4HP1-201ENST00000453115 687 ntBASIC20.77■□□□□ 0.91
USP6P35125 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.77■□□□□ 0.91
USP6P35125 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.77■□□□□ 0.91
USP6P35125 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.77■□□□□ 0.91
USP6P35125 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
USP6P35125 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.77■□□□□ 0.91
USP6P35125 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.77■□□□□ 0.91
USP6P35125 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.77■□□□□ 0.91
USP6P35125 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.77■□□□□ 0.91
USP6P35125 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.77■□□□□ 0.91
USP6P35125 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6P35125 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
USP6P35125 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6P35125 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.77■□□□□ 0.91
USP6P35125 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6P35125 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
USP6P35125 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6P35125 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6P35125 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 AC010491.1-201ENST00000563101 2797 ntBASIC20.76■□□□□ 0.91
USP6P35125 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6P35125 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms