Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF1P30408 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.15■□□□□ 0.66
TM4SF1P30408 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF1P30408 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TM4SF1P30408 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF1P30408 MESTP3-201ENST00000503460 968 ntBASIC19.15■□□□□ 0.66
TM4SF1P30408 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.15■□□□□ 0.66
TM4SF1P30408 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF1P30408 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
TM4SF1P30408 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.15■□□□□ 0.66
TM4SF1P30408 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF1P30408 MIR3147-201ENST00000577811 66 ntBASIC19.15■□□□□ 0.66
TM4SF1P30408 AC004466.1-201ENST00000599515 1080 ntBASIC19.15■□□□□ 0.66
TM4SF1P30408 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TM4SF1P30408 AL645728.2-202ENST00000641679 227 ntBASIC19.15■□□□□ 0.66
TM4SF1P30408 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF1P30408 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TM4SF1P30408 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.14■□□□□ 0.66
TM4SF1P30408 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM4SF1P30408 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM4SF1P30408 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.14■□□□□ 0.66
TM4SF1P30408 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM4SF1P30408 PCDHA12-202ENST00000613593 2588 ntBASIC19.14■□□□□ 0.65
TM4SF1P30408 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.14■□□□□ 0.65
TM4SF1P30408 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.14■□□□□ 0.65
TM4SF1P30408 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.14■□□□□ 0.65
TM4SF1P30408 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.14■□□□□ 0.65
TM4SF1P30408 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.14■□□□□ 0.65
TM4SF1P30408 MARK2P5-201ENST00000507649 634 ntBASIC19.14■□□□□ 0.65
TM4SF1P30408 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.14■□□□□ 0.65
TM4SF1P30408 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.14■□□□□ 0.65
TM4SF1P30408 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 RN7SL163P-201ENST00000583100 276 ntBASIC19.14■□□□□ 0.65
TM4SF1P30408 RN7SL555P-201ENST00000584742 339 ntBASIC19.14■□□□□ 0.65
TM4SF1P30408 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.14■□□□□ 0.65
TM4SF1P30408 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.14■□□□□ 0.65
TM4SF1P30408 AC068587.8-201ENST00000641239 219 ntBASIC19.14■□□□□ 0.65
TM4SF1P30408 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TM4SF1P30408 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 AC004899.1-201ENST00000424687 1714 ntBASIC19.14■□□□□ 0.65
TM4SF1P30408 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF1P30408 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF1P30408 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.13■□□□□ 0.65
TM4SF1P30408 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.13■□□□□ 0.65
TM4SF1P30408 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.13■□□□□ 0.65
TM4SF1P30408 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 AL805961.1-203ENST00000641078 1258 ntBASIC19.13■□□□□ 0.65
TM4SF1P30408 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 MTHFR-217ENST00000641820 1569 ntBASIC19.13■□□□□ 0.65
TM4SF1P30408 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF1P30408 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF1P30408 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF1P30408 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms