Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 MIR943-201ENST00000401286 94 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
PTPN3P26045 AL590560.3-201ENST00000623350 461 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 AF228730.6-201ENST00000641497 218 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 AC084121.3-201ENST00000641716 218 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 AL109936.8-201ENST00000641772 604 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16■□□□□ 0.15
PTPN3P26045 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16■□□□□ 0.15
PTPN3P26045 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16■□□□□ 0.15
PTPN3P26045 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16■□□□□ 0.15
PTPN3P26045 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 AC044860.1-202ENST00000559481 777 ntBASIC16■□□□□ 0.15
PTPN3P26045 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16■□□□□ 0.15
PTPN3P26045 AC074044.1-201ENST00000609673 707 ntBASIC16■□□□□ 0.15
PTPN3P26045 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PTPN3P26045 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16■□□□□ 0.15
PTPN3P26045 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 AC084364.1-201ENST00000551967 1556 ntBASIC16■□□□□ 0.15
PTPN3P26045 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN3P26045 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16■□□□□ 0.15
PTPN3P26045 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN3P26045 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN3P26045 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN3P26045 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN3P26045 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PTPN3P26045 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN3P26045 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PTPN3P26045 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.99■□□□□ 0.15
PTPN3P26045 TSSK5P-201ENST00000423978 907 ntBASIC15.99■□□□□ 0.15
PTPN3P26045 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.99■□□□□ 0.15
PTPN3P26045 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.99■□□□□ 0.15
PTPN3P26045 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN3P26045 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.99■□□□□ 0.15
PTPN3P26045 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.99■□□□□ 0.15
PTPN3P26045 SDHAP3-202ENST00000515467 728 ntBASIC15.99■□□□□ 0.15
PTPN3P26045 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN3P26045 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms