Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
XPAP23025 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.86■□□□□ 0.13
XPAP23025 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 AC036164.1-201ENST00000570544 333 ntBASIC15.86■□□□□ 0.13
XPAP23025 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.86■□□□□ 0.13
XPAP23025 AC007431.3-201ENST00000623221 587 ntBASIC15.86■□□□□ 0.13
XPAP23025 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 AC105233.6-201ENST00000642093 218 ntBASIC15.86■□□□□ 0.13
XPAP23025 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.86■□□□□ 0.13
XPAP23025 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XPAP23025 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
XPAP23025 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 AL603832.2-201ENST00000566195 2125 ntBASIC15.85■□□□□ 0.13
XPAP23025 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 AC018695.7-201ENST00000624587 2492 ntBASIC15.85■□□□□ 0.13
XPAP23025 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.85■□□□□ 0.13
XPAP23025 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.85■□□□□ 0.13
XPAP23025 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.85■□□□□ 0.13
XPAP23025 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 RPL13P2-201ENST00000440687 659 ntBASIC15.85■□□□□ 0.13
XPAP23025 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.85■□□□□ 0.13
XPAP23025 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 API5-211ENST00000534695 560 ntTSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 RARRES2P5-201ENST00000564013 466 ntBASIC15.85■□□□□ 0.13
XPAP23025 TP53TG3HP-202ENST00000569755 579 ntBASIC15.85■□□□□ 0.13
XPAP23025 SPDYE22P-201ENST00000582158 798 ntBASIC15.85■□□□□ 0.13
XPAP23025 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
XPAP23025 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 AC004790.1-201ENST00000612686 536 ntBASIC15.85■□□□□ 0.13
XPAP23025 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 LINC02199-201ENST00000506655 2702 ntBASIC15.85■□□□□ 0.13
XPAP23025 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
XPAP23025 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.85■□□□□ 0.13
XPAP23025 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XPAP23025 PRAL-201ENST00000624952 3286 ntBASIC15.85■□□□□ 0.13
XPAP23025 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
XPAP23025 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms